Genome Assemblies

The legume species the genome assembly describes (e.g. Lens culinaris).
The legume species the genome assembly describes (e.g. Lens culinaris).

The name of the genome assembly you are interested in (partial names are accepted).
  • This assembly of IG 72623 (Lens odemensis) was constructed with long-read data (41x Oxford nanopore reads). The contiguity of the assembly was further validated and improved using HiC data and a genetic map (IG 72543 x IG 72623 intraspecific RIL). The finished assembly is 3.55 Gb arranged in 7 [Read more]
    2022 Aug 5
    IG 72623
  • This assembly of IG 72805 (Lens tomentosus) was constructed with long-read data (60x Oxford nanopore reads). The contiguity of the assembly was further validated and improved using HiC data and a genetic map (LR-90; IG 72614 x IG 72805 intraspecific F2). The finished assembly is 4.07 Gb arranged in [Read more]
    2022 Aug 3
    IG 72805
  • This assembly of BGE 016880 (Lens orientalis) was constructed with long-read data (50x Oxford nanopore reads). The contiguity of the assembly was further validated and improved using HiC data and a genetic map (LR-89; BGE 016880 x IG 72529 intraspecific RIL). The finished assembly is 3.75 Gb [Read more]
    2022 Jun 23
    BGE 016880
  • W6 15578 genome assembly v2.0 is a genome assembly of the wild Tepary bean W6 15578 [Read more]
    2020 Jul 9
    W6 15578 (PI 638833) Chromium 10x + Oxford Nanopore reads
  • The IT97K-499-3 Genome Assembly v1.2 genome assembly was constructed through assembly reconciliation between 8 assemblies focusing on the strengths of multiple assembly software. The finished assembly is 519.4 Mb arranged in 11 pseudo-molecules and 675 unplaced scaffolds. Nearly half of the [Read more]
    2020 Feb 27
    IT97K-499-3
    6/41.7 Mb
  • This CDC Redberry Lens culinaris genome assembly was constructed with long-read data (34x PacBio SMRT, 20x Oxford nanopore reads). The contiguity of the assembly was further validated and improved using HiC data, as well as both an optical and genetic map (LR-01; ILL 1704 x CDC Robin intraspecific [Read more]
    2020 Feb 10
    CDC Redberry ASM
    1,352,216/823
  • This IG 72815 ASM Lens ervoides genome assembly was constructed with long-read data (52x Oxford nanopore reads). The contiguity of the assembly was further validated and improved using HiC data and a genetic map (LR-66; L1-02-827 x IG 72815 intraspecific RIL). The finished assembly is 2.87 Gb [Read more]
    2019 Nov 27
    IG 72815 ASM
    176/4,706,458
  • W6 15578 genome assembly v1.2 is a pre-release genome assembly of the wild Tepary bean W6 15578. It consists of 635 scaffolds covering a total of 661,867,501 bases with a maximum scaffold size of 30,522,608 bases. This assembly shows robust coverage of the gene space as reflected in detection of 92. [Read more]
    2019 May 29
    W6 15578 (PI 638833)
    17/12,576,913
  • The CT30 Genome Assembly v1.0 genome assembly will aid in determining the genetic control of virulence. The virulent race 0 was sequenced at 1481-fold genomic coverage which was assembled into 50 scaffolds with a total size of 56.10 Mb and an N50 scaffold length of 4.89 Mb. The assembly consists of [Read more]
    2018 Jul 2
    CT-30 (race 0)
  • This version represents a new PacBio-based assembly of the Phaseolus vulgaris G19833 genome. It consists of 83.2x long-read sequence coverage of the genome which was assembled into 11 chromosomes containing 95.3% of the sequence [Read more]
    2017 Apr 11
    G19833
    5/49.7 Mb
  • This version represents the final short read assembly of the Lens culinaris CDC Redberry genome which was distributed as a pre-release version. DNA was extracted from single seed descent plants and sequencing was carried out by next generation DNA sequencing with paired-end, mate-pair and long read [Read more]
    2016 May 16
    CDC Redberry ASM
    ~54,000/14,872
  • This assembly represents the second version of the desi chickpea ICC4958 genome. It consists entirely of short-read sequencing data including whole genome shotgun and paired end libraries using next generation sequencing platforms. It represents a 2.7-fold increase in the length of pseudomolecules [Read more]
    2015 Aug 11
    ICC4958
    6/39,901,017
  • This assembly represents the fourth version of the Medicago truncatula A17 genome. It consists entirely of short read data from a mixture of sequencing technologies including Illumina, 454 and Sanger. The scaffolds were ordered based on an optical map, genetic map and BAC/fosmid-end sequences [Read more]
    2014 Jun 18
    A17 strain
    4/49,172,423
  • This assembly represents the first version of the kabuli chickpea CDC Frontier genome capturing 73.8% of the estimated sequence and consisting of 153 Gb (207X coverage) short-read sequencing data [Read more]
    2013 Jan 27
    CDC Frontier
    175/697,963
  • The Williams 82 version 4 assembly (Wm82v4) builds on the widely-used assembly version 2, as well as an incremental version 3 that involved incorporation of BAC sequence to fill contig gaps in 2016. The Wm82v2 assembly was primarily Sanger-based, and new gap-filling in v3 and v4 utilized PacBio- [Read more]
    2010 Jan 14
    Williams 82
    10/49.9 Mb