Genome Assemblies

This assembly of IG 72623 (Lens odemensis) was constructed with long-read data (41x Oxford nanopore reads). There were a total of 3305 contigs with the longest contig spanning 20.3 Mb. The contiguity of the assembly was further validated and improved using HiC data and a genetic map (IG 72543 x IG [Read more]

This assembly of BGE 016880 (Lens orientalis) was constructed with long-read data (50x Oxford nanopore reads). There were 3 706 total contigs with the longest contig spanning 11.4 Mb. The contiguity of the assembly was further validated and improved using HiC data and a genetic map (LR-89; BGE [Read more]

W6 15578 genome assembly v2.0 is a genome assembly of the wild Tepary bean W6 15578 [Read more]

The IT97K-499-3 Genome Assembly v1.2 genome assembly was constructed through assembly reconciliation between 8 assemblies focusing on the strengths of multiple assembly software. The finished assembly is 519.4 Mb arranged in 11 pseudo-molecules and 675 unplaced scaffolds. Nearly half of the [Read more]

This CDC Redberry Lens culinaris genome assembly was constructed with long-read data (34x PacBio SMRT, 20x Oxford nanopore reads). The contiguity of the assembly was further validated and improved using HiC data, as well as both an optical and genetic map (LR-01; ILL 1704 x CDC Robin intraspecific [Read more]

This IG 72815 ASM Lens ervoides genome assembly was constructed with long-read data (52x Oxford nanopore reads). The contiguity of the assembly was further validated and improved using HiC data and a genetic map (LR-66; L1-02-827 x IG 72815 intraspecific RIL). The finished assembly is 2.87 Gb [Read more]

This is a high-quality PacBio-based assembly of the Phaseolus vulgaris UI111 genome. It consists of 141.5x long-read sequence coverage assembled into 11 chromosomes, which contain 98.9% of the sequence. Additionally, homozygous SNPs and INDELs were corrected using ~180x of Illumina reads (2x150, [Read more]

W6 15578 genome assembly v1.2 is a pre-release genome assembly of the wild Tepary bean W6 15578. It consists of 635 scaffolds covering a total of 661,867,501 bases with a maximum scaffold size of 30,522,608 bases. This assembly shows robust coverage of the gene space as reflected in detection of 92. [Read more]

The CT30 Genome Assembly v1.0 genome assembly will aid in determining the genetic control of virulence. The virulent race 0 was sequenced at 1481-fold genomic coverage which was assembled into 50 scaffolds with a total size of 56.10 Mb and an N50 scaffold length of 4.89 Mb. The assembly consists of [Read more]

This version represents a new PacBio-based assembly of the Phaseolus vulgaris G19833 genome. It consists of 83.2x long-read sequence coverage of the genome which was assembled into 11 chromosomes containing 95.3% of the sequence [Read more]

This version represents the final short read assembly of the Lens culinaris CDC Redberry genome which was distributed as a pre-release version. DNA was extracted from single seed descent plants and sequencing was carried out by next generation DNA sequencing with paired-end, mate-pair and long read [Read more]

This assembly represents the second version of the desi chickpea ICC4958 genome. It consists entirely of short-read sequencing data including whole genome shotgun and paired end libraries using next generation sequencing platforms. It represents a 2.7-fold increase in the length of pseudomolecules [Read more]

This assembly represents the fourth version of the Medicago truncatula A17 genome. It consists entirely of short read data from a mixture of sequencing technologies including Illumina, 454 and Sanger. The scaffolds were ordered based on an optical map, genetic map and BAC/fosmid-end sequences [Read more]

This assembly represents the first version of the kabuli chickpea CDC Frontier genome capturing 73.8% of the estimated sequence and consisting of 153 Gb (207X coverage) short-read sequencing data [Read more]