JBrowse

The JBrowse genome browser allows you to visually explore genomes and their associated large-scale datasets. JBrowse is a widely used application that is fast, intuitive, and compatible with most web browsers.

Cicer arietinum (Chickpea)

Sequence Assembly: Cicer arientinum (Kabuli): CDC Frontier Genome Assembly v1.0

This JBrowse represents the ∼738Mb draft whole genome shotgun sequence of CDC Frontier, a kabuli chickpea variety, which contains an estimated 28,269 genes.

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Phaseolus vulgaris (Dry Bean)

Sequence Assembly: Phaseolus vulgaris: G19833 Genome Assembly v2.1
This JBrowse references a new PacBio-based assembly of the Phaseolus vulgaris G19833 genome with 27,433 genes.

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Cicer arietinum (Chickpea)

Sequence Assembly: Cicer arientinum (Desi): ICC4958 Genome Assembly v2.0
This JBrowse visualizes the desi chickpea ICC4958 genome assembly (version 2.0) which coveres more than 94% of the estimated gene space and predicted the presence of 30,257 genes.

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Lens culinaris (Cultivated Lentil)

Sequence Assembly: Lens culinaris: CDC Redberry Genome Assembly v1.2
This JBrowse includes pre-release data generated by the University of Saskatchewan. Please contact Dr. Kirstin Bett before publishing any manuscripts which utilized this JBrowse.

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Colletotrichum lentis

Sequence Assembly: Colletotrichum lentis: CT30 Genome Assembly v1.0
This pathogen-focused JBrowse is useful for exploring genes contributing to pathogen virulence. Specifically Colletotrichum lentis causes anthracnose in Lentil which is a serious disease in lentil that can account for up to 70% crop loss.

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Medicago truncatula (Medicago)

Sequence Assembly: Medicago truncatula: A17 Genome Assembly v4.0
This assembly represents the fourth version of the Medicago truncatula A17 genome consists of ~412 Mb sequence and 50,894 genes.

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Glycine max (Soybean)

Sequence Assembly: Glycine max: Williams 82 Genome Assembly v4.0
The JBrowse is based on the 4th version of the Williams82 Soybean genome assembly with an N50 of 419.3 kbp and 52,872 genes.

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