AGILE Activity 1a (Exome-targeted Re-sequencing)

AGILE Activity 1a (Exome-targeted Re-sequencing)

This research project aims to efficiently expand the genetic diversity of the Canadian lentil breeding program. Targeted-exome resequencing of the AGILE lentil diversity panel will provide the information needed to determine which germplasm can provide that genetic diversity, as well as, be used to develop markers to efficiently select against poor adaptation.

Published Materials
  1. Guerra-Garcia A, Haile T, Ogutcen E, Bett KE, von Wettberg EJ. An evolutionary look into the history of lentil reveals unexpected diversity.. Evolutionary applications. 2022 Aug; 15(8):1313-1325.
  2. Ogutcen Ezgi, Ramsay Larissa, von Wettberg Eric, Bett Kirstin. Capturing variation in Lens (Fabaceae): development and utility of an exome capture array for lentil. Applications in Plant Science. 2018.
Metadata
Year(s)
2014-2019
Research Category
Breeding & Genetics
Funding Agencies
Saskatchewan Pulse Growers, Western Grains Research Foundation, Genome Prairie, Genome Canada, Government of Saskatchewan, University of Saskatchewan [grant: BRE1516].
Genotype Experiment
Genotyping Assay
AGILE Exome Capture Array
Genotype Matrix Thumbnail

You can access the genotypic data through the genotypic matrix. By clicking the link below, you will be redirected to the genotype matrix with filter criteria filled in based on the page you are on. Keep in mind at a minimum, germplasm needs to be supplied in order to access the data.

Filtered Genotype Matrix
Related Projects
This Study is Instance Of the following:
NameType
Lentil Breeding & Genetics Project
This Study is Part Of the following:
NameType
AGILE: Application of Genomic Innovation in the Lentil EconomyProject