LR-68 (IG 72643 x 3339-3 RIL); Zhe Cao et al., UNPUBLISHED 2023
| Published Map Name | LR-68
|
|---|---|
| Map Type | genetic
|
| Units | cM
|
| Population Type | Recombinant Inbred Line (RIL) Population
|
| Population Size | 124
|
This genetic map was developed by Zhe Cao using the LR-68 GBS set aligned to the Lens culinaris CDC Redberry v2.0 genome assembly. It consists of 818 binned genetic markers across 6 linkage groups, with genetic markers from Lcu.2RBY.Chr2 and Lcu.2RBY.Chr5 forming LG2.
The set of unbinned markers (2543 in total) were binned using a python script written by Zhe Cao, which is available here: https://github.com/cjun01/linkage_map_binning
| A: | 3339-3 (L. culinaris) |
| B: | IG 72643 (L. orientalis) |
| U: | Missing |
This segregation matrix represents the published map and includes markers binned using the method described above.
Unbinned Markers Segregation Matrix
This segregation matrix contains all the markers originally used in the analysis in an unbinned form. The position coordinates match those in the published map with previously binned markers all having the same position.
| Name | Description | Type |
|---|---|---|
| Genetic Map | Trait | Name | Peak Position | Confidence Interval | Peak LOD | Additive Effect | |
|---|---|---|---|---|---|---|---|
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