Genetic and transcriptomic analysis of lentil seed imbibition and dormancy in relation to its domestication

Objectives
  • Measure seed coat thickness and how many seeds absorb water across multiple site-years to determine the stability of this trait. Specifically, we looked at LR-68 recombinant imbred lines.

  • Explore the genetic differences between the wild and domesticated lentil dormancy using existing genotypic data for LR-68 to perform QTL analysis and look for trait-associated genes and markers for use in the breeding program.

Germplasm
Germplasm Genus
Lens
Germplasm Scientific Name
  • Lens culinaris
  • Lens orientalis
Germplasm Collection
LR-68 (L. orientalis IG 72643 x L. culinaris 3339-3)
Executive Summary

Seed dormancy delays sprouting until the conditions are right, which is important for wild plants. But when crops were domesticated, farmers preferred seeds that germinated quickly and evenly, so they lost this dormancy. The first step in germination is when seeds take in water, a process called imbibition. Legume seeds have a hard outer coating that keeps water out.

In our study, we used a domesticated lentil variety and a wild lentil to explore how genes affect imbibition. We measured the seed coat thickness and how many seeds absorb water, and looked at the genetic differences between the wild and domesticated lentils. We found that these traits were stable across different years and locations, suggesting they are inherited. We found that a few specific genes control these traits. Among the important genes were two that help break down complex sugars in the cell wall: a β-glucosidase, which was linked to better water uptake, and a β-galactosidase, linked to less water absorption.

Attribution
The following researchers and their organizations were involved in this work and should be credited for their role in any resulting or related publications.
Data Custodian
Kirstin E Bett
Collaborator
  • Azalea Guerra Garcia
  • Petr Smykal
Data Curator
Research Organization
Experiments
Grant Activity
Title
EVOLVES: Enhancing the Value of Lentil Variation for Ecosystem Survival
Data Custodian
  • Kirstin E Bett
  • Albert Vandenberg
Research Organization
Funding Range

2019-2023