Sequence Variant Search

The legume species the Sequence Variant was designed for (e.g. Lens culinaris).
The legume species the Sequence Variant was designed for (e.g. Lens culinaris).

While the term variant refers to a position in the genome with variation, genetic marker refers specifically to an assay which samples that variation.

The type of variant you are interested in (e.g. SNP).
The experiment you are interested in (e.g. AGILE; partial names are accepted).
The name or accession of the variant (e.g. LcC00002p390; partial names are accepted).
From
The name of the sequence the variants are located on.
The numeric start position of the range you are interested in.
to
The numeric end position of the range you are interested in.
The range of the genome you would like to display variants from (e.g. LcChr2:1000-50000).
NameVariant TypeOriginal LocationSource Species
CaC10000p392SNPCaFContig10000:391..392Cicer arietinum
CaC10001p201SNPCaFContig10001:200..201Cicer arietinum
CaC10001p340SNPCaFContig10001:339..340Cicer arietinum
CaC10001p389SNPCaFContig10001:388..389Cicer arietinum
CaC10002p144SNPCaFContig10002:143..144Cicer arietinum
CaC10002p471SNPCaFContig10002:470..471Cicer arietinum
CaC10002p7SNPCaFContig10002:6..7Cicer arietinum
CaC10002p91SNPCaFContig10002:90..91Cicer arietinum
CaC10003p175SNPCaFContig10003:174..175Cicer arietinum
CaC10003p434SNPCaFContig10003:433..434Cicer arietinum
CaC10003p435SNPCaFContig10003:434..435Cicer arietinum
CaC10004p355SNPCaFContig10004:354..355Cicer arietinum
CaC10006p374SNPCaFContig10006:373..374Cicer arietinum
CaC10008p320SNPCaFContig10008:319..320Cicer arietinum
CaC10008p321SNPCaFContig10008:320..321Cicer arietinum
CaC10009p279SNPCaFContig10009:278..279Cicer arietinum
CaC10009p284SNPCaFContig10009:283..284Cicer arietinum
CaC10009p306SNPCaFContig10009:305..306Cicer arietinum
CaC1000p116SNPCaFContig1000:115..116Cicer arietinum
CaC1000p33SNPCaFContig1000:32..33Cicer arietinum
CaC1000p347SNPCaFContig1000:346..347Cicer arietinum
CaC1000p501SNPCaFContig1000:500..501Cicer arietinum
CaC1000p86SNPCaFContig1000:85..86Cicer arietinum
CaC1000p87SNPCaFContig1000:86..87Cicer arietinum
CaC1000p89SNPCaFContig1000:88..89Cicer arietinum
CaC10010p165SNPCaFContig10010:164..165Cicer arietinum
CaC10010p168SNPCaFContig10010:167..168Cicer arietinum
CaC10010p169SNPCaFContig10010:168..169Cicer arietinum
CaC10010p172SNPCaFContig10010:171..172Cicer arietinum
CaC10011p372SNPCaFContig10011:371..372Cicer arietinum
CaC10012p497SNPCaFContig10012:496..497Cicer arietinum
CaC10012p516SNPCaFContig10012:515..516Cicer arietinum
CaC10012p517SNPCaFContig10012:516..517Cicer arietinum
CaC10012p535SNPCaFContig10012:534..535Cicer arietinum
CaC10012p571SNPCaFContig10012:570..571Cicer arietinum
CaC10012p599SNPCaFContig10012:598..599Cicer arietinum
CaC10013p124SNPCaFContig10013:123..124Cicer arietinum
CaC10013p79SNPCaFContig10013:78..79Cicer arietinum
CaC10013p92SNPCaFContig10013:91..92Cicer arietinum
CaC10014p71SNPCaFContig10014:70..71Cicer arietinum
CaC10014p72SNPCaFContig10014:71..72Cicer arietinum
CaC10014p73SNPCaFContig10014:72..73Cicer arietinum
CaC10015p114SNPCaFContig10015:113..114Cicer arietinum
CaC10015p249SNPCaFContig10015:248..249Cicer arietinum
CaC10017p109SNPCaFContig10017:108..109Cicer arietinum
CaC10017p94SNPCaFContig10017:93..94Cicer arietinum
CaC1001p15SNPCaFContig1001:14..15Cicer arietinum
CaC1001p218SNPCaFContig1001:217..218Cicer arietinum
CaC1001p468SNPCaFContig1001:467..468Cicer arietinum
CaC10020p256SNPCaFContig10020:255..256Cicer arietinum
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